Package: BPRMeth
Type: Package
Title: Model higher-order methylation profiles
Version: 1.38.0
Authors@R: person("C. A.", "Kapourani", email = "kapouranis.andreas@gmail.com",
                  role = c("aut", "cre"))
Author: Chantriolnt-Andreas Kapourani [aut, cre]
Maintainer: Chantriolnt-Andreas Kapourani
 <kapouranis.andreas@gmail.com>
Description: The BPRMeth package is a probabilistic method to quantify
        explicit features of methylation profiles, in a way that would
        make it easier to formally use such profiles in downstream
        modelling efforts, such as predicting gene expression levels or
        clustering genomic regions or cells according to their
        methylation profiles.
LinkingTo: Rcpp, RcppArmadillo
Depends: R (>= 3.5.0), GenomicRanges
License: GPL-3 | file LICENSE
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.1.0
Imports: assertthat, methods, MASS, doParallel, parallel, e1071, earth,
        foreach, randomForest, stats, IRanges, S4Vectors, data.table,
        graphics, truncnorm, mvtnorm, Rcpp (>= 0.12.14), matrixcalc,
        magrittr, kernlab, ggplot2, cowplot, BiocStyle
Suggests: testthat, knitr, rmarkdown
VignetteBuilder: knitr
biocViews: ImmunoOncology, DNAMethylation, GeneExpression,
        GeneRegulation, Epigenetics, Genetics, Clustering,
        FeatureExtraction, Regression, RNASeq, Bayesian, KEGG,
        Sequencing, Coverage, SingleCell
PackageStatus: Deprecated
Config/pak/sysreqs: cmake make libuv1-dev
Repository: Bioconductor 3.23
Date/Publication: 2026-04-28 12:44:41 UTC
RemoteUrl: https://github.com/bioc/BPRMeth
RemoteRef: RELEASE_3_23
RemoteSha: 789a5fba5d6704a7bf8bdf07357f5e791a0f5f89
NeedsCompilation: yes
Packaged: 2026-11-06 13:29:53 UTC; root