Package: CSSQ
Title: Chip-seq Signal Quantifier Pipeline
Version: 1.24.0
Author: Ashwath Kumar [aut], Michael Y Hu [aut], Yajun Mei [aut],
        Yuhong Fan [aut]
Maintainer: Fan Lab at Georgia Institute of Technology
 <yuhong.fan@biology.gatech.edu>
Description: This package is desgined to perform statistical analysis
        to identify statistically significant differentially bound
        regions between multiple groups of ChIP-seq dataset.
License: Artistic-2.0
Encoding: UTF-8
biocViews: ChIPSeq, DifferentialPeakCalling, Sequencing, Normalization
Depends: SummarizedExperiment, GenomicRanges, IRanges, S4Vectors,
        rtracklayer
Imports: GenomicAlignments, GenomicFeatures, Rsamtools, ggplot2,
        grDevices, stats, utils
Suggests: BiocStyle, knitr, rmarkdown, markdown
VignetteBuilder: knitr
RoxygenNote: 7.0.0
Config/pak/sysreqs: make libbz2-dev liblzma-dev libpng-dev libxml2-dev
        libssl-dev xz-utils zlib1g-dev
Repository: Bioconductor 3.23
Date/Publication: 2026-04-28 12:51:31 UTC
RemoteUrl: https://github.com/bioc/CSSQ
RemoteRef: RELEASE_3_23
RemoteSha: e7dea6b668b0cabc3d836784f148f47e4e8004da
NeedsCompilation: no
Packaged: 2026-10-17 08:49:23 UTC; root