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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "CaMutQC" in publications use:'
type: software
license: GPL-3.0-only
title: 'CaMutQC: An R Package for Comprehensive Filtration and Selection of Cancer
  Somatic Mutations'
version: 1.8.0
doi: 10.1016/j.csbj.2025.07.011
identifiers:
- type: doi
  value: 10.32614/CRAN.package.CaMutQC
abstract: CaMutQC is able to filter false positive mutations generated due to technical
  issues, as well as to select candidate cancer mutations through a series of well-structured
  functions by labeling mutations with various flags. And a detailed and vivid filter
  report will be offered after completing a whole filtration or selection section.
  Also, CaMutQC integrates serveral methods and gene panels for Tumor Mutational Burden
  (TMB) estimation.
authors:
- family-names: Wang
  given-names: Xin
  email: sylviawang555@gmail.com
  orcid: https://orcid.org/0000-0002-6072-599X
preferred-citation:
  type: article
  title: 'CaMutQC: An R package for integrative quality control and filtration of
    cancer somatic mutations'
  authors:
  - family-names: Wang
    given-names: Xin
    email: sylviawang555@gmail.com
    orcid: https://orcid.org/0000-0002-6072-599X
  - family-names: Jiang
    given-names: Tengjia
  - family-names: Shen
    given-names: Ao
  - family-names: Chen
    given-names: Yaru
  - family-names: Zhou
    given-names: Yanqing
  - family-names: Liu
    given-names: Jie
  - family-names: Zhao
    given-names: Shuhan
  - family-names: Chen
    given-names: Shifu
  - family-names: Ren
    given-names: Jian
  - family-names: Zhao
    given-names: Qi
  journal: Computational and Structural Biotechnology Journal
  year: '2025'
  volume: '27'
  doi: 10.1016/j.csbj.2025.07.011
  url: https://doi.org/10.1016/j.csbj.2025.07.011
  start: 3147–3154
repository: https://bioc-release.r-universe.dev
repository-code: https://github.com/likelet/CaMutQC
commit: fa2c753916d49075a7525a6b1619eb22f9858c9c
url: https://github.com/likelet/CaMutQC
date-released: '2026-04-28'
contact:
- family-names: Wang
  given-names: Xin
  email: sylviawang555@gmail.com
  orcid: https://orcid.org/0000-0002-6072-599X