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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "CellBench" in publications use:'
type: software
license: GPL-3.0-only
title: 'CellBench: Construct Benchmarks for Single Cell Analysis Methods'
version: 1.28.0
doi: 10.1093/bioinformatics/btz889
identifiers:
- type: doi
  value: 10.32614/CRAN.package.CellBench
abstract: This package contains infrastructure for benchmarking analysis methods and
  access to single cell mixture benchmarking data. It provides a framework for organising
  analysis methods and testing combinations of methods in a pipeline without explicitly
  laying out each combination. It also provides utilities for sampling and filtering
  SingleCellExperiment objects, constructing lists of functions with varying parameters,
  and multithreaded evaluation of analysis methods.
authors:
- family-names: Su
  given-names: Shian
  email: su.s@wehi.edu.au
- family-names: Freytag
  given-names: Saskia
- family-names: Tian
  given-names: Luyi
- family-names: Dong
  given-names: Xueyi
- family-names: Ritchie
  given-names: Matthew
preferred-citation:
  type: article
  title: 'CellBench: R/Bioconductor software for comparing single-cell RNA-seq analysis
    methods'
  authors:
  - family-names: Su
    given-names: Shian
    email: su.s@wehi.edu.au
  - family-names: Tian
    given-names: Luyi
  - family-names: Dong
    given-names: Xueyi
  - family-names: Hickey
    given-names: Peter F.
  - family-names: Freytag
    given-names: Saskia
  - family-names: Ritchie
    given-names: Matthew E.
  doi: 10.1093/bioinformatics/btz889
  journal: Bioinformatics
  year: '2019'
  month: '11'
  volume: '36'
  issue: '7'
  start: 2288-2290
repository: https://bioc-release.r-universe.dev
repository-code: https://github.com/Shians/CellBench
commit: aa4e9a0dbf911aaa9f153d945e3747a24886338b
url: https://github.com/shians/cellbench
date-released: '2026-04-28'
contact:
- family-names: Su
  given-names: Shian
  email: su.s@wehi.edu.au