Package: CellMixS
Type: Package
Title: Evaluate Cellspecific Mixing
Version: 1.28.0
Authors@R: c(person("Almut", "Lütge", role = c("aut", "cre"), email = "almut.lue@gmail.com"))
Description: CellMixS provides metrics and functions to evaluate batch
        effects, data integration and batch effect correction in single
        cell trancriptome data with single cell resolution. Results can
        be visualized and summarised on different levels, e.g. on cell,
        celltype or dataset level.
License: GPL (>=2)
Imports: BiocNeighbors, ggplot2, scater, viridis, cowplot,
        SummarizedExperiment, SingleCellExperiment, tidyr, magrittr,
        dplyr, ggridges, stats, purrr, methods, BiocParallel,
        BiocGenerics
Depends: kSamples, R (>= 4.0)
biocViews: SingleCell, Transcriptomics, GeneExpression, BatchEffect
BugReports: https://github.com/almutlue/CellMixS/issues
URL: https://github.com/almutlue/CellMixS
Encoding: UTF-8
RoxygenNote: 7.1.1
VignetteBuilder: knitr
Suggests: BiocStyle, knitr, rmarkdown, testthat, limma, Rtsne
Config/pak/sysreqs: libicu-dev zlib1g-dev
Repository: Bioconductor 3.23
Date/Publication: 2026-04-28 12:49:55 UTC
RemoteUrl: https://github.com/bioc/CellMixS
RemoteRef: RELEASE_3_23
RemoteSha: ea6b38d5dcaf15bd9ff73bf379862ebdc80e04d2
NeedsCompilation: no
Packaged: 2026-11-07 09:04:25 UTC; root
Author: Almut Lütge [aut, cre]
Maintainer: Almut Lütge <almut.lue@gmail.com>