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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "ChIPanalyser" in publications use:'
type: software
license: GPL-3.0-only
title: 'ChIPanalyser: ChIPanalyser: Predicting Transcription Factor Binding Sites'
version: 1.34.0
doi: 10.1093/nar/gku1269
identifiers:
- type: doi
  value: 10.32614/CRAN.package.ChIPanalyser
abstract: 'ChIPanalyser is a package to predict and understand TF binding by utilizing
  a statistical thermodynamic model. The model incorporates 4 main factors thought
  to drive TF binding: Chromatin State, Binding energy, Number of bound molecules
  and a scaling factor modulating TF binding affinity. Taken together, ChIPanalyser
  produces ChIP-like profiles that closely mimic the patterns seens in real ChIP-seq
  data.'
authors:
- family-names: Martin
  given-names: Patrick CN
  email: pcnmartin@gmail.com
- family-names: Zabet
  given-names: Nicolea Radu
preferred-citation:
  type: article
  title: Estimating binding properties of transcription factors from genome-wide binding
    profiles
  authors:
  - family-names: B
    given-names: Zabet NR & Adryan
  doi: 10.1093/nar/gku1269
  journal: Nucleic Acids Research
  year: '2015'
repository: https://bioc-release.r-universe.dev
commit: 96f45b69d08b703a9b96fbb9a0c24784dcec5de8
date-released: '2017-09-01'
contact:
- family-names: Martin
  given-names: Patrick CN
  email: pcnmartin@gmail.com