| Title: | Example data for the ChIPexoQual package, which implements a quality control pipeline for ChIP-exo data |
|---|---|
| Description: | Data for the ChIPexoQual package, consisting of (3) chromosome 1 aligned reads from a ChIP-exo experiment for FoxA1 in mouse liver cell lines aligned to the mm9 genome. |
| Authors: | Rene Welch, Dongjun Chung, Sunduz Keles |
| Maintainer: | Rene Welch <[email protected]> |
| License: | GPL (>= 2) |
| Version: | 1.36.0 |
| Built: | 2026-10-10 11:09:41 UTC |
| Source: | https://github.com/bioc/ChIPexoQualExample |
bam file with the reads aligned to chr1 from FoxA1 in mm9 liver cell lines published by Serandour et al., 2013. This package contains the files
bam files (with their respective indexes)
ChIPexo_carroll_FoxA1_mouse_rep1_chr1.bam
ChIPexo_carroll_FoxA1_mouse_rep2_chr1.bam
ChIPexo_carroll_FoxA1_mouse_rep3_chr1.bam
and their respective index files.