Overview | Description | Data | Example with conumee | Session info | References
Package: CopyNeutralIMA 1.30.0
Xavier Pastor Hostench
CopyNeutralIMA: Copy Neutral Illumina Methylation Arrays
Provides a set of genomic copy neutral samples hybridized using Illumina Methylation arrays (450k and EPIC).
Authors:
CopyNeutralIMA_1.30.0.tar.gz
CopyNeutralIMA_1.30.0.tar.gz(r-4.7-any)CopyNeutralIMA_1.30.0.tar.gz(r-4.6-any)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
CopyNeutralIMA/json (API)
| # Install 'CopyNeutralIMA' in R: |
| install.packages('CopyNeutralIMA', repos = c('https://bioc-release.r-universe.dev', 'https://cloud.r-project.org')) |
On BioConductor:CopyNeutralIMA-1.31.0(data/experiment 3.24)CopyNeutralIMA-1.30.0(data/experiment 3.23)
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
experimentdatahomo_sapiens_datamicroarraydatatwochanneldatamethylationarraydatageodatapkg
Last updated from:1f134d8b36 (on RELEASE_3_23). Checks:1 NOTE, 3 OK. Indexed: no.
This is a data package. Data packages may be large and do not get checked across all platforms.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| bioc-checks | NOTE | 350 | ||
| linux-devel | OK | 469 | ||
| source / vignettes | OK | 604 | ||
| linux-release | OK | 559 |
Exports:getCopyNeutralRGSet
Dependencies:AnnotationDbiAnnotationHubaskpassBiobaseBiocBaseUtilsBiocFileCacheBiocGenericsBiocManagerBiocVersionBiostringsbitbit64blobcachemclicpp11crayoncurlDBIdbplyrdplyrExperimentHubfastmapfilelockgenericsgluehttrhttr2IRangesjsonliteKEGGRESTlifecyclemagrittrmemoisemimeopensslpillarpkgconfigpngpurrrR6rappdirsrbibutilsRdpackrlangRSQLiteS4VectorsSeqinfostringistringrsystibbletidyrtidyselectutf8vctrswithrXVectoryaml
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Reference samples for analysis of IlluminaHumanMethylation arrays. | CopyNeutralIMA-package CopyNeutralIMA |
| Accessor to the data objects. | getCopyNeutralRGSet |
