Package: CyTOFpower 1.18.1

Anne-Maud Ferreira

CyTOFpower: Power analysis for CyTOF experiments

This package is a tool to predict the power of CyTOF experiments in the context of differential state analyses. The package provides a shiny app with two options to predict the power of an experiment: i. generation of in-sicilico CyTOF data, using users input ii. browsing in a grid of parameters for which the power was already precomputed.

Authors:Anne-Maud Ferreira [cre, aut], Catherine Blish [aut], Susan Holmes [aut]

CyTOFpower_1.18.1.tar.gz
CyTOFpower_1.18.1.zip(r-4.7)CyTOFpower_1.18.1.zip(r-4.6)CyTOFpower_1.18.1.zip(r-4.5)
CyTOFpower_1.18.1.tgz(r-4.6-any)CyTOFpower_1.18.1.tgz(r-4.5-any)
CyTOFpower_1.18.1.tar.gz(r-4.7-any)CyTOFpower_1.18.1.tar.gz(r-4.6-any)
CyTOFpower_1.18.1.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
CyTOFpower/json (API)
NEWS

# Install 'CyTOFpower' in R:
install.packages('CyTOFpower', repos = c('https://bioc-release.r-universe.dev', 'https://cloud.r-project.org'))

On BioConductor:CyTOFpower-1.19.1(bioc 3.24)CyTOFpower-1.18.1(bioc 3.23)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

flowcytometrysinglecellcellbiologystatisticalmethodsoftware

4.30 score 2 scripts 150 downloads 1 exports 226 dependencies

Last updated from:73b70eaac1 (on RELEASE_3_23). Checks:1 NOTE, 9 OK. Indexed: no.

TargetResultTimeFilesSyslog
bioc-checksNOTE226
linux-devel-x86_64OK260
source / vignettesOK275
linux-release-x86_64OK303
macos-release-arm64OK126
macos-oldrel-arm64OK156
windows-develOK163
windows-releaseOK155
windows-oldrelOK155
wasm-releaseOK187

Exports:CyTOFpower

Dependencies:abindALLbackportsbase64encBHbigmemorybigmemory.sriBiobaseBiocGenericsbiocmakeBiocParallelbootbroombslibcachemcarcarDatacaretcirclizeclasscliclockclueclustercodetoolscolorRampscolorspacecommonmarkComplexHeatmapConsensusClusterPluscorrplotcowplotcpp11crayoncrosstalkCytoGLMMcytolibdata.tableDelayedArraydendextendDerivdiagramdiffcytdigestdir.expirydoBydoParalleldplyrDTe1071edgeRellipseemmeansestimabilityevaluatefactoextraFactoMineRfarverfastmapfilelockflashClustflexmixflowCoreFlowSOMfontawesomeforeachforecastformatRFormulafracdifffsfutile.loggerfutile.optionsfuturefuture.applygenericsGenomicRangesGetoptLongggforceggnewscaleggplot2ggpubrggrepelggsciggsignifGlobalOptionsglobalsgluegowergridExtragtablehardhathighrhtmltoolshtmlwidgetshttpuvigraphipredIRangesisobanditeratorsjquerylibjsonliteKernSmoothknitrlabelinglambda.rlaterlatticelavalazyevalleapslifecyclelimmalistenvlme4lmtestlocfitlogginglubridatemagrittrMASSMatrixMatrixGenericsMatrixModelsmatrixStatsmbestmemoisemgcvmicrobenchmarkmimeminqaModelMetricsmodelrmodeltoolsmultcompmultcompViewmvtnormnlmenloptrnnetnumDerivotelparallellypbkrtestpheatmappillarpkgconfigplyrpngpolyclippolynompROCprodlimprogressrpromisesproxypurrrquantregR6rappdirsrbibutilsRColorBrewerRcppRcppArmadilloRcppEigenRdpackrecipesreformulasreshape2Rhdf5librjsonrlangrmarkdownrpartRProtoBufLibrstatixRtsneS4ArraysS4VectorsS7sandwichsassscalesscatterplot3dSeqinfoshapeshinyshinyFeedbackshinyjsshinyMatrixsnowsourcetoolsSparseArraySparseMsparsevctrsSQUAREMstatmodstringistringrstrucchangeSummarizedExperimentsurvivalsystemfontsTH.datatibbletidyrtidyselecttimechangetimeDatetinytextweenrtzdburcautf8uuidvctrsviridisviridisLitewithrxfunXMLxtableXVectoryamlzoo

Power analysis for CyTOF experiments

Anne-Maud Ferreira

Rendered fromCyTOFpower.Rmdusingknitr::rmarkdownon Jun 12 2026.

Last update: 2021-10-18
Started: 2021-09-24