Package: DELocal 1.12.0

Rishi Das Roy

DELocal: Identifies differentially expressed genes with respect to other local genes

The goal of DELocal is to identify DE genes compared to their neighboring genes from the same chromosomal location. It has been shown that genes of related functions are generally very far from each other in the chromosome. DELocal utilzes this information to identify DE genes comparing with their neighbouring genes.

Authors:Rishi Das Roy [aut, cre]

DELocal_1.12.0.tar.gz
DELocal_1.12.0.zip(r-4.7)DELocal_1.12.0.zip(r-4.6)DELocal_1.12.0.zip(r-4.5)
DELocal_1.12.0.tgz(r-4.6-any)DELocal_1.12.0.tgz(r-4.5-any)
DELocal_1.12.0.tar.gz(r-4.7-any)DELocal_1.12.0.tar.gz(r-4.6-any)
DELocal_1.12.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
DELocal/json (API)
NEWS

# Install 'DELocal' in R:
install.packages('DELocal', repos = c('https://bioc-release.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/dasroy/delocal/issues

On BioConductor:DELocal-1.13.0(bioc 3.24)DELocal-1.12.0(bioc 3.23)

geneexpressiondifferentialexpressionrnaseqtranscriptomics

4.78 score 1 packages 8 scripts 306 downloads 2 exports 59 dependencies

Last updated from:4ea3f25a1f (on RELEASE_3_23). Checks:1 NOTE, 9 OK. Indexed: no.

TargetResultTimeFilesSyslog
bioc-checksNOTE186
linux-devel-x86_64OK300
source / vignettesOK269
linux-release-x86_64OK296
macos-release-arm64OK206
macos-oldrel-arm64OK198
windows-develOK246
windows-releaseOK223
windows-oldrelOK235
wasm-releaseOK155

Exports:DELocalplotNeighbourhood

Dependencies:abindBHBiobaseBiocGenericsBiocParallelclicodetoolscpp11DelayedArrayDESeq2dplyrfarverformatRfutile.loggerfutile.optionsgenericsGenomicRangesggplot2gluegtableIRangesisobandlabelinglambda.rlatticelifecyclelimmalocfitmagrittrMatrixMatrixGenericsmatrixStatspillarpkgconfigplyrR6RColorBrewerRcppRcppArmadilloreshape2rlangS4ArraysS4VectorsS7scalesSeqinfosnowSparseArraystatmodstringistringrSummarizedExperimenttibbletidyselectutf8vctrsviridisLitewithrXVector

DELocal

Rendered fromDELocal.Rmdusingknitr::rmarkdownon May 29 2026.

Last update: 2026-03-12
Started: 2023-03-27