# --------------------------------------------
# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
# --------------------------------------------
 
cff-version: 1.2.0
message: 'To cite package "DiffBind" in publications use:'
type: software
license: Artistic-2.0
title: 'DiffBind: Differential Binding Analysis of ChIP-Seq Peak Data'
version: 3.22.1
identifiers:
- type: doi
  value: 10.32614/CRAN.package.DiffBind
abstract: Compute differentially bound sites from multiple ChIP-seq experiments using
  affinity (quantitative) data. Also enables occupancy (overlap) analysis and plotting
  functions.
authors:
- family-names: Stark
  given-names: Rory
  email: bioconductor@starkhome.com
- family-names: Brown
  given-names: Gord
preferred-citation:
  type: manual
  title: 'DiffBind: differential binding analysis of ChIP-Seq peak data'
  authors:
  - family-names: Stark
    given-names: Rory
    email: bioconductor@starkhome.com
  - family-names: Brown
    given-names: Gordon
  year: '2011'
  url: https://bioconductor.org/packages/release/bioc/vignettes/DiffBind/inst/doc/DiffBind.pdf
repository: https://bioc-release.r-universe.dev
commit: 9d4230535ab12e5985bd2905dfc883758379e122
url: https://bioconductor.org/packages/DiffBind/
date-released: '2026-04-30'
contact:
- family-names: Stark
  given-names: Rory
  email: bioconductor@starkhome.com
references:
- type: article
  title: Differential oestrogen receptor binding is associated with clinical outcome
    in breast cancer
  authors:
  - family-names: Ross-Innes
    given-names: Caryn S.
  - family-names: Stark
    given-names: Rory
  - family-names: Teschendorff
    given-names: Andrew E.
  - family-names: Holmes
    given-names: Kelly A.
  - family-names: Ali
    given-names: H. Raza
  - family-names: Dunning
    given-names: Mark J.
  - family-names: Brown
    given-names: Gordon D.
  - family-names: Gojis
    given-names: Ondrej
  - family-names: Ellis
    given-names: Ian O.
  - family-names: Green
    given-names: Andrew R.
  - family-names: Ali
    given-names: Simak
  - family-names: Chin
    given-names: Suet-Feung
  - family-names: Palmieri
    given-names: Carlo
  - family-names: Caldas
    given-names: Carlos
  - family-names: Carroll
    given-names: Jason S.
  journal: Nature
  year: '2012'
  volume: '481'
  url: https://www.nature.com/articles/nature10730
  start: 389-393