Motivation | Functions | Example | Session information
Package: DropletTestFiles 1.22.0
Aaron Lun
DropletTestFiles: Test Files for Single-Cell Droplet Utilities
Assorted files generated from droplet-based single-cell protocols, to be used for testing functions in DropletUtils. Primarily intended for storing files that directly come out of processing pipelines like 10X Genomics' CellRanger software, prior to the formation of a SingleCellExperiment object. Unlike other packages, this is not designed to provide objects that are immediately ready for analysis.
Authors:
DropletTestFiles_1.22.0.tar.gz
DropletTestFiles_1.22.0.tar.gz(r-4.7-any)DropletTestFiles_1.22.0.tar.gz(r-4.6-any)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
DropletTestFiles/json (API)
| # Install 'DropletTestFiles' in R: |
| install.packages('DropletTestFiles', repos = c('https://bioc-release.r-universe.dev', 'https://cloud.r-project.org')) |
On BioConductor:DropletTestFiles-1.23.0(data/experiment 3.24)DropletTestFiles-1.22.0(data/experiment 3.23)
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
experimenthubexperimentdataexpressiondatasequencingdatarnaseqdatasinglecelldatadatapkg
Last updated from:8f6529b584 (on RELEASE_3_23). Checks:1 WARNING, 2 NOTE, 1 OK. Indexed: no.
This is a data package. Data packages may be large and do not get checked across all platforms.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| bioc-checks | WARNING | 156 | ||
| linux-devel | NOTE | 326 | ||
| source / vignettes | OK | 247 | ||
| linux-release | NOTE | 311 |
Exports:getTestFilelistTestFiles
Dependencies:AnnotationDbiAnnotationHubaskpassBiobaseBiocBaseUtilsBiocFileCacheBiocGenericsBiocManagerBiocVersionBiostringsbitbit64blobcachemclicpp11crayoncurlDBIdbplyrdplyrExperimentHubfastmapfilelockgenericsgluehttrhttr2IRangesjsonliteKEGGRESTlifecyclemagrittrmemoisemimeopensslpillarpkgconfigpngpurrrR6rappdirsrlangRSQLiteS4VectorsSeqinfostringistringrsystibbletidyrtidyselectutf8vctrswithrXVectoryaml
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| The 'DropletTestFiles' package | DropletTestFiles |
| List available test files | getTestFile listTestFiles |
