Please cite the relevant papers for individual methods and the EpiDISH
paper for the whole package.

  Zheng SC, Breeze CE, Beck S, Teschendorff AE. 2018. Identification of
  differentially methylated cell-types in Epigenome-Wide Association
  Studies. Nat Methods 15: 1059-1066.

A BibTeX entry for LaTeX users is

  @Article{,
    author = {Shijie C. Zheng and Charles E. Breeze and Stephan Beck and Andrew E. Teschendorff},
    title = {Identification of differentially methylated cell-types in Epigenome-Wide Association Studies},
    journal = {Nature Methods},
    volume = {15},
    number = {12},
    pages = {1059},
    year = {2018},
  }

  Zheng SC, Webster AP, Dong D, Feber A, Graham DG, Sullivan R, Jevons
  S, Lovat LB, Beck S, Widschwendter M, Teschendorff AE. 2018. A novel
  cell-type deconvolution algorithm reveals substantial contamination
  by immune cells in saliva, buccal and cervix. Epigenomics 10:
  925-940.

A BibTeX entry for LaTeX users is

  @Article{,
    author = {Shijie C. Zheng and Amy P. Webster and Danyue Dong and Andy Feber and David G. Graham and Roisin Sullivan and Sarah Jevons and Laurence B. Lovat and Stephan Beck and Martin Widschwendter and Andrew E. Teschendorff},
    title = {A novel cell-type deconvolution algorithm reveals substantial contamination by immune cells in saliva, buccal and cervix},
    journal = {Epigenomics},
    year = {2018},
    volume = {10},
    number = {7},
  }

  Teschendorff AE, Breeze CE, Zheng SC, Beck S. 2017. A comparison of
  reference-based algorithms for correcting cell-type heterogeneity in
  Epigenome-Wide Association Studies. BMC Bioinformatics 18: 105.

A BibTeX entry for LaTeX users is

  @Article{,
    author = {Andrew E. Teschendorff and Charles E. Breeze and Shijie C. Zheng and Stephan Beck},
    title = {A comparison of reference-based algorithms for correcting cell-type heterogeneity in Epigenome-Wide Association Studies},
    journal = {BMC bioinformatics},
    volume = {18},
    number = {1},
    pages = {105},
    year = {2017},
  }

  Luo Q et al. A meta-analysis of immune-cell fractions at high
  resolution reveals novel associations with common phenotypes and
  health outcomes. Genome Med. 2023 Jul 31;15(1):59.

A BibTeX entry for LaTeX users is

  @Article{,
    author = {Qi Luo and Varun B. Dwaraka and Qingwen Chen and Huige Tong and Tianyu Zhu and Kirsten Seale and Joseph M. Raffaele and Shijie C. Zheng and Tavis L. Mendez and Yulu Chen and Natalia Carreras and Sofina Begum and Kevin Mendez and Sarah Voisin and Nir Eynon and Jessica A. Lasky-Su and Ryan Smith and Andrew E. Teschendorff},
    title = {A meta-analysis of immune-cell fractions at high resolution reveals novel associations with common phenotypes and health outcomes},
    journal = {Genome Medicine},
    volume = {15},
    number = {1},
    pages = {59},
    year = {2023},
  }

  Houseman EA, Accomando WP, Koestler DC, Christensen BC, Marsit CJ,
  Nelson HH, Wiencke JK, Kelsey KT. 2012. DNA methylation arrays as
  surrogate measures of cell mixture distribution. BMC Bioinformatics
  13: 86.

A BibTeX entry for LaTeX users is

  @Article{,
    author = {Eugene A. Houseman and William P. Accomando and Devin C. Koestler and Brock C. Christensen and Carmen J. Marsit and Heather H. Nelson and John K. Wiencke and Karl T. Kelsey},
    title = {DNA methylation arrays as surrogate measures of cell mixture distribution},
    journal = {BMC bioinformatics},
    volume = {13},
    number = {1},
    pages = {86},
    year = {2012},
  }

  Newman AM, Liu CL, Green MR, Gentles AJ, Feng W, Xu Y, Hoang CD,
  Diehn M, Alizadeh AA. 2015. Robust enumeration of cell subsets from
  tissue expression profiles. Nat Methods 12: 453-457.

A BibTeX entry for LaTeX users is

  @Article{,
    author = {Aaron M. Newman and Chih L. Liu and Michael R. Green and Andrew J. Gentles and Weiguo Feng and Yue Xu and Chuong D. Hoang and Maximilian Diehn and Ash A. Alizadeh},
    title = {Robust enumeration of cell subsets from tissue expression profiles},
    journal = {Nature Methods},
    volume = {12},
    number = {5},
    pages = {453},
    year = {2015},
  }

  Teschendorff AE, Zheng SC. 2017. Cell-type deconvolution in
  epigenome-wide association studies: a review and recommendations.
  Epigenomics 9: 757-768.

A BibTeX entry for LaTeX users is

  @Article{,
    author = {Andrew E. Teschendorff and Shijie C. Zheng},
    title = {Cell-type deconvolution in epigenome-wide association studies: a review and recommendations},
    journal = {Epigenomics},
    volume = {9},
    number = {5},
    pages = {757},
    year = {2017},
  }