Package: FieldEffectCrc
Version: 1.22.0
Date: 2020-0920
Title: Tumor, tumor-adjacent normal, and healthy colorectal
        transcriptomes as SummarizedExperiment objects
Authors@R: c(
  person("Christopher", "Dampier", email="chd5n@virginia.edu", role=c("aut", "cre"), comment=c(ORCID="0000-0003-3099-6462")),
  person("Bioconductor", "Package Maintainer", email="maintainer@bioconductor.org", role=c("ctb"))
  )
Depends: utils
Suggests: knitr, rmarkdown, BiocGenerics, sva, BiocManager
Imports: BiocStyle, RUnit, SummarizedExperiment, ExperimentHub (>=
        0.99.6), AnnotationHub, DESeq2
Description: Processed RNA-seq data for 1,139 human primary colorectal
        tissue samples across three phenotypes, including tumor, normal
        adjacent-to-tumor, and healthy, available as Synapse ID
        syn22237139 on synapse.org. Data have been parsed into
        SummarizedExperiment objects available via ExperimentHub to
        facilitate reproducibility and extension of results from
        Dampier et al. (PMCID: PMC7386360, PMID: 32764205).
License: Artistic-2.0
URL:
        http://bioconductor.org/packages/release/bioc/html/FieldEffectCrc.html
biocViews: ExperimentData, ReproducibleResearch, Tissue,
        Homo_sapiens_Data, ColonCancerData, RNASeqData, ExpressionData,
        ExperimentHub, SequencingData
VignetteBuilder: knitr
NeedsCompilation: no
BugReports: https://github.com/Bioconductor/FieldEffectCrc/
Encoding: UTF-8
Config/pak/sysreqs: cmake make libicu-dev libpng-dev libuv1-dev
        libssl-dev zlib1g-dev
Repository: Bioconductor 3.23
Date/Publication: 2026-04-28 12:34:20 UTC
RemoteUrl: https://github.com/bioc/FieldEffectCrc
RemoteRef: RELEASE_3_23
RemoteSha: 0331dcc408ce33e7ead630969d186c20b6df20ec
Packaged: 2026-10-10 11:15:16 UTC; root
Author: Christopher Dampier [aut, cre] (ORCID:
    <https://orcid.org/0000-0003-3099-6462>),
  Bioconductor Package Maintainer [ctb]
Maintainer: Christopher Dampier <chd5n@virginia.edu>