Package: FitHiC 1.38.0

Ruyu Tan

FitHiC: Confidence estimation for intra-chromosomal contact maps

Fit-Hi-C is a tool for assigning statistical confidence estimates to intra-chromosomal contact maps produced by genome-wide genome architecture assays such as Hi-C.

Authors:Ferhat Ay [aut], Timothy L. Bailey [aut], William S. Noble [aut], Ruyu Tan [aut, cre, trl]

FitHiC_1.38.0.tar.gz
FitHiC_1.38.0.zip(r-4.7)FitHiC_1.38.0.zip(r-4.6)FitHiC_1.38.0.zip(r-4.5)
FitHiC_1.38.0.tgz(r-4.6-x86_64)FitHiC_1.38.0.tgz(r-4.6-arm64)FitHiC_1.38.0.tgz(r-4.5-x86_64)FitHiC_1.38.0.tgz(r-4.5-arm64)
FitHiC_1.38.0.tar.gz(r-4.7-arm64)FitHiC_1.38.0.tar.gz(r-4.7-x86_64)FitHiC_1.38.0.tar.gz(r-4.6-arm64)FitHiC_1.38.0.tar.gz(r-4.6-x86_64)
FitHiC_1.38.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
FitHiC/json (API)
NEWS

# Install 'FitHiC' in R:

install.packages('FitHiC', repos = c('https://bioc-release.r-universe.dev', 'https://cloud.r-project.org'))

Uses libs:

c++– GNU Standard C++ Library v3

On BioConductor:FitHiC-1.39.0(bioc 3.24)FitHiC-1.38.0(bioc 3.23)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

dna3dstructure software cpp

4.78 score 5 scripts 462 downloads 6 mentions 1 exports 3 dependencies

Last updated from:567e74e089 (on RELEASE_3_23). Checks:1 WARNING, 13 OK. Indexed: no.

Target	Result	Time
bioc-checks	WARNING	137
linux-devel-arm64	OK	179
linux-devel-x86_64	OK	207
source / vignettes	OK	236
linux-release-arm64	OK	179
linux-release-x86_64	OK	203
macos-release-arm64	OK	198
macos-release-x86_64	OK	315
macos-oldrel-arm64	OK	124
macos-oldrel-x86_64	OK	280
windows-devel	OK	262
windows-release	OK	199
windows-oldrel	OK	229
wasm-release	OK	108