Package: GA4GHshiny 1.34.0

Welliton Souza

GA4GHshiny: Shiny application for interacting with GA4GH-based data servers

GA4GHshiny package provides an easy way to interact with data servers based on Global Alliance for Genomics and Health (GA4GH) genomics API through a Shiny application. It also integrates with Beacon Network.

Authors:Welliton Souza [aut, cre], Benilton Carvalho [ctb], Cristiane Rocha [ctb], Elizabeth Borgognoni [ctb]

GA4GHshiny_1.34.0.tar.gz
GA4GHshiny_1.34.0.zip(r-4.7)GA4GHshiny_1.34.0.zip(r-4.6)GA4GHshiny_1.34.0.zip(r-4.5)
GA4GHshiny_1.34.0.tgz(r-4.6-any)GA4GHshiny_1.34.0.tgz(r-4.5-any)
GA4GHshiny_1.34.0.tar.gz(r-4.7-any)GA4GHshiny_1.34.0.tar.gz(r-4.6-any)
GA4GHshiny_1.34.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html
card.svg |card.png
GA4GHshiny/json (API)

# Install 'GA4GHshiny' in R:
install.packages('GA4GHshiny', repos = c('https://bioc-release.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/labbcb/ga4ghshiny/issues

On BioConductor:GA4GHshiny-1.35.0(bioc 3.24)GA4GHshiny-1.34.0(bioc 3.23)

gui

4.78 score 2 stars 3 scripts 348 downloads 2 exports 114 dependencies

Last updated from:c5b6b2026d (on RELEASE_3_23). Checks:1 WARNING, 7 ERROR, 2 OK. Indexed: no.

TargetResultTimeFilesSyslog
bioc-checksWARNING226
linux-devel-x86_64ERROR468
source / vignettesOK333
linux-release-x86_64ERROR496
macos-release-arm64ERROR370
macos-oldrel-arm64ERROR233
windows-develERROR370
windows-releaseERROR349
windows-oldrelERROR357
wasm-releaseOK208

Exports:appcountGenotype

Dependencies:abindAnnotationDbiaskpassbase64encBHBiobaseBiocGenericsBiocIOBiocParallelBiostringsbitbit64bitopsblobBSgenomebslibcachemcigarilloclicodetoolscommonmarkcpp11crayoncrosstalkcurlDBIDelayedArraydigestdplyrDTevaluatefastmapfontawesomeformatRfsfutile.loggerfutile.optionsGA4GHclientgenericsGenomeInfoDbGenomicAlignmentsGenomicFeaturesGenomicRangesgluehighrhtmltoolshtmlwidgetshttpuvhttrIRangesjquerylibjsonliteKEGGRESTknitrlambda.rlaterlatticelazyevallifecyclemagrittrMatrixMatrixGenericsmatrixStatsmemoisemimeopensslopenxlsxotelpillarpkgconfigpngpromisespurrrR6rappdirsRcppRCurlrestfulrRhtslibrjsonrlangrmarkdownRsamtoolsRSQLitertracklayerS4ArraysS4VectorssassSeqinfoshinyshinyjsshinythemessnowsourcetoolsSparseArraystringistringrSummarizedExperimentsystibbletidyrtidyselecttinytexUCSC.utilsutf8VariantAnnotationvctrswithrxfunXMLxtableXVectoryamlzip

GA4GHshiny

Rendered fromGA4GHshiny.Rmdusingknitr::rmarkdownon Jun 03 2026.

Last update: 2017-10-11
Started: 2017-05-06