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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "GEOquery" in publications use:'
type: software
license: MIT
title: 'GEOquery: Get data from NCBI Gene Expression Omnibus (GEO)'
version: 2.80.0
doi: 10.1093/bioinformatics/btm254
identifiers:
- type: doi
  value: 10.32614/CRAN.package.GEOquery
- type: url
  value: http://seandavi.github.io/GEOquery
- type: url
  value: http://seandavi.github.io/GEOquery/
abstract: The NCBI Gene Expression Omnibus (GEO) is a public repository of microarray
  data. Given the rich and varied nature of this resource, it is only natural to want
  to apply BioConductor tools to these data. GEOquery is the bridge between GEO and
  BioConductor.
authors:
- family-names: Davis
  given-names: Sean
  email: seandavi@gmail.com
  orcid: https://orcid.org/0000-0002-8991-6458
preferred-citation:
  type: article
  title: 'GEOquery: a bridge between the Gene Expression Omnibus (GEO) and BioConductor'
  authors:
  - family-names: Davis
    given-names: Sean
    email: seandavi@gmail.com
    orcid: https://orcid.org/0000-0002-8991-6458
  - family-names: Meltzer
    given-names: Paul
  journal: Bioinformatics
  year: '2007'
  volume: '14'
  doi: 10.1093/bioinformatics/btm254
  start: '1846'
  end: '1847'
repository: https://bioc-release.r-universe.dev
repository-code: https://github.com/seandavi/GEOquery/issues/new
commit: 8b846af9fe721553ba0333ffc724fc4e26ff05dc
url: https://github.com/seandavi/GEOquery
date-released: '2025-09-03'
contact:
- family-names: Davis
  given-names: Sean
  email: seandavi@gmail.com
  orcid: https://orcid.org/0000-0002-8991-6458