Package: GNET2
Type: Package
Title: Constructing gene regulatory networks from expression data
        through functional module inference
Version: 1.28.0
Author: Chen Chen, Jie Hou and Jianlin Cheng
Maintainer: Chen Chen <ccm3x@mail.missouri.edu>
Description: Cluster genes to functional groups with E-M process.
        Iteratively perform TF assigning and Gene assigning, until the
        assignment of genes did not change, or max number of iterations
        is reached.
License: Apache License 2.0
Encoding: UTF-8
LinkingTo: Rcpp
Depends: R (>= 3.6)
Imports:
        ggplot2,xgboost,Rcpp,reshape2,grid,DiagrammeR,methods,stats,matrixStats,graphics,SummarizedExperiment,dplyr,igraph,
        grDevices, utils
RoxygenNote: 7.1.0
Suggests: knitr, rmarkdown
VignetteBuilder: knitr
biocViews: GeneExpression, Regression, Network, NetworkInference,
        Software
URL: https://github.com/chrischen1/GNET2
BugReports: https://github.com/chrischen1/GNET2/issues
PackageStatus: Deprecated
Config/pak/sysreqs: cmake libglpk-dev make libicu-dev libuv1-dev
        libxml2-dev libx11-dev zlib1g-dev
Repository: Bioconductor 3.23
Date/Publication: 2026-04-28 12:49:52 UTC
RemoteUrl: https://github.com/bioc/GNET2
RemoteRef: RELEASE_3_23
RemoteSha: 13b58eec1ddb59e2937d77c566e2b53ba4ea52c2
NeedsCompilation: yes
Packaged: 2026-11-06 10:47:17 UTC; root