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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "GSCA" in publications use:'
type: software
title: 'GSCA: GSCA: Gene Set Context Analysis'
version: 2.42.0
identifiers:
- type: doi
  value: 10.32614/CRAN.package.GSCA
abstract: GSCA takes as input several lists of activated and repressed genes. GSCA
  then searches through a compendium of publicly available gene expression profiles
  for biological contexts that are enriched with a specified pattern of gene expression.
  GSCA provides both traditional R functions and interactive, user-friendly user interface.
authors:
- family-names: Ji
  given-names: Zhicheng
  email: zji4@jhu.edu
- family-names: Ji
  given-names: Hongkai
preferred-citation:
  type: article
  title: Turning publicly available gene expression data into discoveries using gene
    set context analysis
  authors:
  - family-names: Ji
    given-names: Zhicheng
    email: zji4@jhu.edu
  - family-names: Vokes
    given-names: Steven.A.
  - family-names: Dang
    given-names: Chi.V.
  - family-names: Ji
    given-names: Hongkai
  year: '2015'
  journal: Nucleic Acids Res. gkv873
repository: https://bioc-release.r-universe.dev
commit: 98d6c01d7f71bdd86000be6600db61e64b7f8535
date-released: '2015-12-08'
contact:
- family-names: Ji
  given-names: Zhicheng
  email: zji4@jhu.edu