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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "GenomicSuperSignature" in publications use:'
type: software
license: Artistic-2.0
title: 'GenomicSuperSignature: Interpretation of RNA-seq experiments through robust,
  efficient comparison to public databases'
version: 1.20.0
doi: 10.1038/s41467-022-31411-3
identifiers:
- type: doi
  value: 10.32614/CRAN.package.GenomicSuperSignature
abstract: This package provides a novel method for interpreting new transcriptomic
  datasets through near-instantaneous comparison to public archives without high-performance
  computing requirements. Through the pre-computed index, users can identify public
  resources associated with their dataset such as gene sets, MeSH term, and publication.
  Functions to identify interpretable annotations and intuitive visualization options
  are implemented in this package.
authors:
- family-names: Oh
  given-names: Sehyun
  email: shbrief@gmail.com
- family-names: Waldron
  given-names: Levi
- family-names: Davis
  given-names: Sean
  email: seandavi@gmail.com
preferred-citation:
  type: article
  title: GenomicSuperSignature facilitates interpretation of RNA-seq experiments through
    robust, efficient comparison to public databases
  authors:
  - family-names: Oh
    given-names: Sehyun
    email: shbrief@gmail.com
  - family-names: Geistlinger
    given-names: Ludwig
  - family-names: Ramos
    given-names: Marcel
  - family-names: Blankenberg
    given-names: Daniel
  - family-names: Beek
    given-names: Marius
    name-particle: van den
  - family-names: Taroni
    given-names: Jaclyn N.
  - family-names: Carey
    given-names: Vincent J.
  - family-names: Waldron
    given-names: Levi
  - family-names: Davis
    given-names: Sean
    email: seandavi@gmail.com
  year: '2022'
  volume: '13'
  doi: 10.1038/s41467-022-31411-3
  journal: Nature Communications
repository: https://bioc-release.r-universe.dev
repository-code: https://github.com/shbrief/GenomicSuperSignature
commit: e9774a79d47062f0227ef365dcee07c9a82239dd
url: https://github.com/shbrief/GenomicSuperSignature
date-released: '2025-09-30'
contact:
- family-names: Oh
  given-names: Sehyun
  email: shbrief@gmail.com