Package: HD2013SGI
Type: Package
Title: Mapping genetic interactions in human cancer cells with RNAi and
        multiparametric phenotyping
Version: 1.52.0
Author: Bernd Fischer
Maintainer: Mike Smith <mike.smith@embl.de>
Description: This package contains the experimental data and a complete
        executable transcript (vignette) of the analysis of the HCT116
        genetic interaction matrix presented in the paper "Mapping
        genetic interactions in human cancer cells with RNAi and
        multiparametric phenotyping" by C. Laufer, B. Fischer, M.
        Billmann, W. Huber, M. Boutros; Nature Methods (2013)
        10:427-31. doi: 10.1038/nmeth.2436.
License: Artistic-2.0
LazyLoad: true
Depends: R (>= 2.10.0), RColorBrewer, gplots, geneplotter, splots,
        limma, vcd, LSD,EBImage
Suggests: BiocStyle
SystemRequirements: GNU make
biocViews: ExperimentData, CancerData, ColonCancerData,
        MicrotitrePlateAssayData, CellCulture, Homo_sapiens_Data,
        HighThroughputImagingData
Config/pak/sysreqs: cmake libfftw3-dev make libjpeg-dev libpng-dev
        libtiff-dev libuv1-dev libxml2-dev libssl-dev zlib1g-dev
Repository: Bioconductor 3.23
Date/Publication: 2026-04-28 12:25:33 UTC
RemoteUrl: https://github.com/bioc/HD2013SGI
RemoteRef: RELEASE_3_23
RemoteSha: 1e584be794dfa577eb8a1f0e4b8e7da3a883379b
NeedsCompilation: no
Packaged: 2026-10-10 11:06:06 UTC; root