Package: HistoImagePlot 1.0.0

Ilaria Billato

HistoImagePlot: Plotting functionality for Histopathology pipeline datasets

Create side-by-side visualizations of tissue thumbnail image and HoverNet cell segmentation with colored cell type labels. Functionality automatically retrieves the thumbnail image associated with a HoverNet JSON file and overlays the segmentation data. This package is intended for researchers working with histopathological images, facilitating exploratory analysis, and integrates with the imageFeatureTCGA Bioconductor package.

Authors:Ilaria Billato [aut, cre]

HistoImagePlot_1.0.0.tar.gz
HistoImagePlot_1.0.0.zip(r-4.7)HistoImagePlot_1.0.0.zip(r-4.6)HistoImagePlot_1.0.0.zip(r-4.5)
HistoImagePlot_1.0.0.tgz(r-4.6-any)HistoImagePlot_1.0.0.tgz(r-4.5-any)
HistoImagePlot_1.0.0.tar.gz(r-4.7-any)HistoImagePlot_1.0.0.tar.gz(r-4.6-any)
HistoImagePlot_1.0.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
HistoImagePlot/json (API)
NEWS

# Install 'HistoImagePlot' in R:

install.packages('HistoImagePlot', repos = c('https://bioc-release.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/waldronlab/histoimageplot/issues

On BioConductor:HistoImagePlot-1.1.2(bioc 3.24)HistoImagePlot-1.0.0(bioc 3.23)

software visualization spatial

4.88 score 251 downloads 2 exports 127 dependencies

Last updated from:af4dcb1b95 (on RELEASE_3_23). Checks:1 NOTE, 9 OK. Indexed: no.

Target	Result	Time
bioc-checks	NOTE	201
linux-devel-x86_64	OK	319
source / vignettes	OK	486
linux-release-x86_64	OK	356
macos-release-arm64	OK	204
macos-oldrel-arm64	OK	145
windows-devel	OK	236
windows-release	OK	239
windows-oldrel	OK	225
wasm-release	OK	181