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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "INTACT" in publications use:'
type: software
license: GPL-3.0-only
title: 'INTACT: Integrate TWAS and Colocalization Analysis for Gene Set Enrichment
  Analysis'
version: 1.12.0
doi: 10.32614/CRAN.package.INTACT
abstract: This package integrates colocalization probabilities from colocalization
  analysis with transcriptome-wide association study (TWAS) scan summary statistics
  to implicate genes that may be biologically relevant to a complex trait. The probabilistic
  framework implemented in this package constrains the TWAS scan z-score-based likelihood
  using a gene-level colocalization probability. Given gene set annotations, this
  package can estimate gene set enrichment using posterior probabilities from the
  TWAS-colocalization integration step.
authors:
- name: Jeffrey Okamoto
  email: jokamoto@umich.edu
  orcid: https://orcid.org/0000-0001-9988-1618
- name: Xiaoquan Wen
  email: xwen@umich.edu
  orcid: https://orcid.org/0000-0001-8990-2737
repository: https://bioc-release.r-universe.dev
repository-code: https://github.com/jokamoto97/INTACT
commit: a74cea4b958001fd2c24ff77c515818c38918af8
url: https://github.com/jokamoto97/INTACT
date-released: '2026-04-28'
contact:
- name: Jeffrey Okamoto
  email: jokamoto@umich.edu
  orcid: https://orcid.org/0000-0001-9988-1618