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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "IgGeneUsage" in publications use:'
type: software
license: MIT
title: 'IgGeneUsage: Differential gene usage in immune repertoires'
version: 1.26.0
doi: 10.1093/bioinformatics/btaa174
identifiers:
- type: doi
  value: 10.32614/CRAN.package.IgGeneUsage
abstract: Detection of biases in the usage of immunoglobulin (Ig) genes is an important
  task in immune repertoire profiling. IgGeneUsage detects aberrant Ig gene usage
  between biological conditions using a probabilistic model which is analyzed computationally
  by Bayes inference. With this IgGeneUsage also avoids some common problems related
  to the current practice of null-hypothesis significance testing.
authors:
- family-names: Kitanovski
  given-names: Simo
  email: simo.kitanovski@uni-due.de
preferred-citation:
  type: article
  title: 'IgGeneUsage: differential gene usage in immune repertoires'
  authors:
  - family-names: Kitanovski
    given-names: Simo
    email: simo.kitanovski@uni-due.de
  - family-names: Hoffmann
    given-names: Daniel
  year: '2020'
  journal: Bioinformatics
  doi: 10.1093/bioinformatics/btaa174
  issue: '-3436'
repository: https://bioc-release.r-universe.dev
repository-code: https://github.com/snaketron/IgGeneUsage
commit: 08fbf3746498b3525fb8f377c33f49949167673b
url: https://github.com/snaketron/IgGeneUsage
date-released: '2026-04-28'
contact:
- family-names: Kitanovski
  given-names: Simo
  email: simo.kitanovski@uni-due.de