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# CITATION.cff file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "JohnsonKinaseData" in publications use:'
type: software
license: MIT
title: 'JohnsonKinaseData: Kinase PWMs based on data published by Johnson et al. 2023
  and Yaron-Barir et al. 2024'
version: 1.8.0
doi: 10.32614/CRAN.package.JohnsonKinaseData
abstract: The packages provides position specific weight matrices (PWMs) for 303 human
  serine/threonine and 93 tyrosine kinases originally published in Johnson et al.
  2023 (doi:10.1038/s41586-022-05575-3) and Yaron-Barir et al. 2024 (doi:10.1038/s41586-024-07407-y).
  The package includes basic functionality to score user provided phosphosites. It
  also includes pre-computed PWM scores ("background scores") for a large collection
  of curated human phosphosites which can be used to rank PWM scores relative to the
  background scores ("percentile rank").
authors:
- family-names: Geier
  given-names: Florian
  email: florian.geier@unibas.ch
  orcid: https://orcid.org/0000-0002-9076-9264
repository: https://bioconductor.org/
repository-code: https://github.com/fgeier/JohnsonKinaseData/
commit: 087607c5aca19538aec0a6e04caac783597e91c4
url: https://support.bioconductor.org/t/JohnsonKinaseData
date-released: '2023-09-24'
contact:
- family-names: Geier
  given-names: Florian
  email: florian.geier@unibas.ch
  orcid: https://orcid.org/0000-0002-9076-9264