To cite package ‘MSA2dist’ in publications use: Ullrich K (2026). _MSA2dist: MSA2dist calculates pairwise distances between all sequences of a DNAStringSet or a AAStringSet using a custom score matrix and conducts codon based analysis_. R package version 1.16.0, . A BibTeX entry for LaTeX users is @Manual{, title = {MSA2dist: MSA2dist calculates pairwise distances between all sequences of a DNAStringSet or a AAStringSet using a custom score matrix and conducts codon based analysis}, author = {Kristian K Ullrich}, year = {2026}, note = {R package version 1.16.0}, url = {https://bioconductor.org/packages/MSA2dist}, }