Package: MethTargetedNGS 1.44.0
Muhammad Ahmer Jamil
MethTargetedNGS: Perform Methylation Analysis on Next Generation Sequencing Data
Perform step by step methylation analysis of Next Generation Sequencing data.
Authors:
MethTargetedNGS_1.44.0.tar.gz
MethTargetedNGS_1.44.0.zip(r-4.7)MethTargetedNGS_1.44.0.zip(r-4.6)MethTargetedNGS_1.44.0.zip(r-4.5)
MethTargetedNGS_1.44.0.tgz(r-4.6-any)MethTargetedNGS_1.44.0.tgz(r-4.5-any)
MethTargetedNGS_1.44.0.tar.gz(r-4.7-any)MethTargetedNGS_1.44.0.tar.gz(r-4.6-any)
MethTargetedNGS_1.44.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
MethTargetedNGS/json (API)
| # Install 'MethTargetedNGS' in R: |
| install.packages('MethTargetedNGS', repos = c('https://bioc-release.r-universe.dev', 'https://cloud.r-project.org')) |
On BioConductor:MethTargetedNGS-1.45.0(bioc 3.24)MethTargetedNGS-1.44.0(bioc 3.23)
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
researchfieldgeneticssequencingalignmentsequencematchingdataimport
Last updated from:70d0d2a967 (on RELEASE_3_23). Checks:1 ERROR, 7 NOTE, 2 OK. Indexed: no.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| bioc-checks | ERROR | 163 | ||
| linux-devel-x86_64 | NOTE | 185 | ||
| source / vignettes | OK | 197 | ||
| linux-release-x86_64 | NOTE | 185 | ||
| macos-release-arm64 | NOTE | 120 | ||
| macos-oldrel-arm64 | NOTE | 128 | ||
| windows-devel | NOTE | 125 | ||
| windows-release | NOTE | 129 | ||
| windows-oldrel | NOTE | 118 | ||
| wasm-release | OK | 103 |
Exports:bconvcompare_samplesfishertest_cpghmmbuildmethAlignmethAvgmethEntropymethHeatmapnhmmerodd_ratio
Dependencies:ade4BiocGenericsBiostringsbitopscaToolsclicrayongenericsgluegplotsgtoolsIRangesKernSmoothlatticelifecyclemagrittrMASSnlmepixmappwalignRcppRcppArmadillorlangS4VectorssegmentedSeqinfoseqinrspstringistringrvctrsXVector
