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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "MoleculeExperiment" in publications use:'
type: software
license: MIT
title: 'MoleculeExperiment: Prioritising a molecule-level storage of Spatial Transcriptomics
  Data'
version: 1.12.0
doi: 10.32614/CRAN.package.MoleculeExperiment
abstract: MoleculeExperiment contains functions to create and work with objects from
  the new MoleculeExperiment class. We introduce this class for analysing molecule-based
  spatial transcriptomics data (e.g., Xenium by 10X, Cosmx SMI by Nanostring, and
  Merscope by Vizgen). This allows researchers to analyse spatial transcriptomics
  data at the molecule level, and to have standardised data formats accross vendors.
authors:
- family-names: Peters Couto
  given-names: Bárbara Zita
  email: barbara.zita.peters@couto.de
- family-names: Robertson
  given-names: Nicholas
  email: nicholas.robertson@sydney.edu.au
- family-names: Patrick
  given-names: Ellis
  email: ellis.patrick@sydney.edu.au
- family-names: Ghazanfar
  given-names: Shila
  email: shazanfar@gmail.com
repository: https://bioc-release.r-universe.dev
repository-code: https://github.com/SydneyBioX/MoleculeExperiment
commit: 68d539f36fdbe441b7da2f22b5365313c9d615b7
url: https://github.com/SydneyBioX/MoleculeExperiment
date-released: '2026-04-28'
contact:
- family-names: Ghazanfar
  given-names: Shila
  email: shazanfar@gmail.com