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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "Motif2Site" in publications use:'
type: software
license: GPL-2.0-only
title: 'Motif2Site: Detect binding sites from motifs and ChIP-seq experiments, and
  compare binding sites across conditions'
version: 1.16.0
doi: 10.32614/CRAN.package.Motif2Site
abstract: Detect binding sites using motifs IUPAC sequence or bed coordinates and
  ChIP-seq experiments in bed or bam format. Combine/compare binding sites across
  experiments, tissues, or conditions. All normalization and differential steps are
  done using TMM-GLM method. Signal decomposition is done by setting motifs as the
  centers of the mixture of normal distribution curves.
authors:
- name: Peyman Zarrineh
  email: peyman.zarrineh@manchester.ac.uk
  orcid: https://orcid.org/0000-0003-4820-4101
repository: https://bioc-release.r-universe.dev
repository-code: https://github.com/fls-bioinformatics-core/Motif2Site
commit: 63a0125b52336406e5335eb328099c537f0e0f65
url: https://github.com/fls-bioinformatics-core/Motif2Site
date-released: '2026-04-28'
contact:
- name: Peyman Zarrineh
  email: peyman.zarrineh@manchester.ac.uk
  orcid: https://orcid.org/0000-0003-4820-4101