Package: MsBackendMgf 1.20.0

RforMassSpectrometry Package Maintainer

MsBackendMgf: Mass Spectrometry Data Backend for Mascot Generic Format (mgf) Files

Mass spectrometry (MS) data backend supporting import and export of MS/MS spectra data from Mascot Generic Format (mgf) files. Objects defined in this package are supposed to be used with the Spectra Bioconductor package. This package thus adds mgf file support to the Spectra package.

Authors:RforMassSpectrometry Package Maintainer [cre], Laurent Gatto [aut], Johannes Rainer [aut], Sebastian Gibb [aut], Michael Witting [ctb], Adriano Rutz [ctb], Corey Broeckling [ctb]

MsBackendMgf_1.20.0.tar.gz
MsBackendMgf_1.20.0.zip(r-4.7)MsBackendMgf_1.20.0.zip(r-4.6)MsBackendMgf_1.20.0.zip(r-4.5)
MsBackendMgf_1.20.0.tgz(r-4.6-any)MsBackendMgf_1.20.0.tgz(r-4.5-any)
MsBackendMgf_1.20.0.tar.gz(r-4.7-any)MsBackendMgf_1.20.0.tar.gz(r-4.6-any)
MsBackendMgf_1.20.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
MsBackendMgf/json (API)

# Install 'MsBackendMgf' in R:
install.packages('MsBackendMgf', repos = c('https://bioc-release.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/rformassspectrometry/msbackendmgf/issues

On BioConductor:MsBackendMgf-1.21.0(bioc 3.24)MsBackendMgf-1.20.0(bioc 3.23)

infrastructureproteomicsmassspectrometrymetabolomicsdataimport

7.33 score 5 stars 2 packages 89 scripts 1.1k downloads 7 exports 23 dependencies

Last updated from:476e6b53d5 (on RELEASE_3_23). Checks:1 NOTE, 9 OK. Indexed: no.

TargetResultTimeFilesSyslog
bioc-checksNOTE168
linux-devel-x86_64OK231
source / vignettesOK217
linux-release-x86_64OK229
macos-release-arm64OK171
macos-oldrel-arm64OK93
windows-develOK152
windows-releaseOK141
windows-oldrelOK142
wasm-releaseOK108

Exports:backendInitializeexportMsBackendAnnotatedMgfMsBackendMgfreadMgfreadMgfSplitspectraVariableMapping

Dependencies:BHBiocGenericsBiocParallelclueclustercodetoolscpp11data.tableformatRfsfutile.loggerfutile.optionsgenericsIRangeslambda.rMASSMetaboCoreUtilsMsCoreUtilsProtGenericsRcppS4VectorssnowSpectra

Description and usage of MsBackendMgf

Rendered fromMsBackendMgf.Rmdusingknitr::rmarkdownon May 29 2026.

Last update: 2025-04-07
Started: 2020-04-16

Readme and manuals

Help Manual

Help pageTopics
MS data backend for MGF filesbackendInitialize,MsBackendAnnotatedMgf-method backendInitialize,MsBackendMgf-method export,MsBackendMgf-method MsBackendAnnotatedMgf MsBackendMgf MsBackendMgf-class spectraVariableMapping,MsBackendMgf-method
Reading MGF filesreadMgf readMgfSplit