Package: MsBackendMsp 1.16.0

Johannes Rainer

MsBackendMsp: Mass Spectrometry Data Backend for NIST msp Files

Mass spectrometry (MS) data backend supporting import and handling of MS/MS spectra from NIST MSP Format (msp) files. Import of data from files with different MSP *flavours* is supported. Objects from this package add support for MSP files to Bioconductor's Spectra package. This package is thus not supposed to be used without the Spectra package that provides a complete infrastructure for MS data handling.

Authors:Neumann Steffen [aut], Johannes Rainer [aut, cre], Michael Witting [ctb]

MsBackendMsp_1.16.0.tar.gz
MsBackendMsp_1.16.0.zip(r-4.7)MsBackendMsp_1.16.0.zip(r-4.6)MsBackendMsp_1.16.0.zip(r-4.5)
MsBackendMsp_1.16.0.tgz(r-4.6-any)MsBackendMsp_1.16.0.tgz(r-4.5-any)
MsBackendMsp_1.16.0.tar.gz(r-4.7-any)MsBackendMsp_1.16.0.tar.gz(r-4.6-any)
MsBackendMsp_1.16.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
MsBackendMsp/json (API)
NEWS

# Install 'MsBackendMsp' in R:
install.packages('MsBackendMsp', repos = c('https://bioc-release.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/rformassspectrometry/msbackendmsp/issues

On BioConductor:MsBackendMsp-1.17.0(bioc 3.24)MsBackendMsp-1.16.0(bioc 3.23)

infrastructureproteomicsmassspectrometrymetabolomicsdataimportmass-spectrometry

6.74 score 5 stars 2 packages 46 scripts 622 downloads 5 exports 23 dependencies

Last updated from:9637e55cdc (on RELEASE_3_23). Checks:1 NOTE, 9 OK. Indexed: no.

TargetResultTimeFilesSyslog
bioc-checksNOTE177
linux-devel-x86_64OK224
source / vignettesOK258
linux-release-x86_64OK250
macos-release-arm64OK173
macos-oldrel-arm64OK123
windows-develOK145
windows-releaseOK155
windows-oldrelOK134
wasm-releaseOK134

Exports:backendInitializeexportMsBackendMspreadMspspectraVariableMapping

Dependencies:BHBiocGenericsBiocParallelclueclustercodetoolscpp11data.tableformatRfsfutile.loggerfutile.optionsgenericsIRangeslambda.rMASSMetaboCoreUtilsMsCoreUtilsProtGenericsRcppS4VectorssnowSpectra

MsBackendMsp

Rendered fromMsBackendMsp.Rmdusingknitr::rmarkdownon May 29 2026.

Last update: 2024-04-04
Started: 2022-02-02

Readme and manuals

Help Manual

Help pageTopics
MS data backend for msp filesbackendInitialize,MsBackendMsp-method export,MsBackendMsp-method MsBackendMsp MsBackendMsp-class spectraVariableMapping,MsBackendMsp-method
Reading MSP filesreadMsp