Package: NanoStringNCTools Title: NanoString nCounter Tools Description: Tools for NanoString Technologies nCounter Technology. Provides support for reading RCC files into an ExpressionSet derived object. Also includes methods for QC and normalizaztion of NanoString data. Version: 1.20.0 Encoding: UTF-8 Authors@R: c(person("Patrick", "Aboyoun", role = c("aut")), person("Nicole", "Ortogero", email = "nortogero@nanostring.com", role = c("aut")), person("Maddy", "Griswold", email = "mgriswold@nanostring.com", role = c("cre")), person("Zhi", "Yang", role = c("ctb"))) Depends: R (>= 3.6), Biobase, S4Vectors, ggplot2 Imports: BiocGenerics, Biostrings, ggbeeswarm, ggiraph, ggthemes, grDevices, IRanges, methods, pheatmap, RColorBrewer, stats, utils Suggests: biovizBase, ggbio, RUnit, rmarkdown, knitr, qpdf License: MIT Collate: SignatureSet-class.R RccMetadata.R NanoStringRccSet-class.R NanoStringRccSet-validity.R NanoStringRccSet-accessors.R NanoStringRccSet-signatures.R NanoStringRccSet-subset.R NanoStringRccSet-utils.R NanoStringRccSet-summary.R NanoStringRccSet-qc.R NanoStringRccSet-normalize.R NanoStringRccSet-munge.R NanoStringRccSet-ggplot.R NanoStringRccSet-autoplot.R readRccFile.R readRlfFile.R readNanoStringRccSet.R writeNanoStringRccSet.R utils.R biocViews: GeneExpression, Transcription, CellBasedAssays, DataImport, Transcriptomics, Proteomics, mRNAMicroarray, ProprietaryPlatforms, RNASeq VignetteEngine: knitr VignetteBuilder: knitr Config/pak/sysreqs: libcairo2-dev cmake libfontconfig1-dev libfreetype6-dev make libpng-dev libuv1-dev zlib1g-dev Repository: Bioconductor 3.23 Date/Publication: 2026-04-28 12:54:49 UTC RemoteUrl: https://github.com/bioc/NanoStringNCTools RemoteRef: RELEASE_3_23 RemoteSha: c299e726ff2267218e6344e2eb1b11ac48fbbba7 NeedsCompilation: no Packaged: 2026-11-01 17:24:37 UTC; root Author: Patrick Aboyoun [aut], Nicole Ortogero [aut], Maddy Griswold [cre], Zhi Yang [ctb] Maintainer: Maddy Griswold