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# CITATION.cff file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "OSCA.basic" in publications use:'
type: software
license: CC-BY-4.0
title: 'OSCA.basic: Single-Cell Analysis Basics'
version: 1.20.0
doi: 10.32614/CRAN.package.OSCA.basic
abstract: Deploys basic analysis chapters for the "Orchestrating Single Cell Analysis
  with Bioconductor" book. This describes the steps of a simple single-cell RNA-seq
  analysis, involving quality control, normalization, various forms of dimensionality
  reduction, clustering into subpopulations, detection of marker genes, and annotation
  of cell types. It is intended for users who already have some familiarity with R
  and want to get hands-on with some basic single-cell analyses.
authors:
- family-names: Amezquita
  given-names: Robert
- family-names: Lun
  given-names: Aaron
  email: infinite.monkeys.with.keyboards@gmail.com
- family-names: Hicks
  given-names: Stephanie
- family-names: Gottardo
  given-names: Raphael
- family-names: Hickey
  given-names: Peter
  email: peter.hickey@gmail.com
repository: https://bioconductor.org/
repository-code: https://github.com/OSCA-source/OSCA.basic
commit: 71cb54c7f1d513bc199771af86ed1b94f359e276
url: https://github.com/OSCA-source/OSCA.basic
date-released: '2025-09-29'
contact:
- family-names: Hickey
  given-names: Peter
  email: peter.hickey@gmail.com