Package: Omixer 1.22.0

Lucy Sinke

Omixer: Omixer: multivariate and reproducible sample randomization to proactively counter batch effects in omics studies

Omixer - an Bioconductor package for multivariate and reproducible sample randomization, which ensures optimal sample distribution across batches with well-documented methods. It outputs lab-friendly sample layouts, reducing the risk of sample mixups when manually pipetting randomized samples.

Authors:Lucy Sinke [cre, aut]

Omixer_1.22.0.tar.gz
Omixer_1.22.0.zip(r-4.7)Omixer_1.22.0.zip(r-4.6)Omixer_1.22.0.zip(r-4.5)
Omixer_1.22.0.tgz(r-4.6-any)Omixer_1.22.0.tgz(r-4.5-any)
Omixer_1.22.0.tar.gz(r-4.7-any)Omixer_1.22.0.tar.gz(r-4.6-any)
Omixer_1.22.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
Omixer/json (API)
NEWS

# Install 'Omixer' in R:
install.packages('Omixer', repos = c('https://bioc-release.r-universe.dev', 'https://cloud.r-project.org'))

On BioConductor:Omixer-1.23.0(bioc 3.24)Omixer-1.22.0(bioc 3.23)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

datarepresentationexperimentaldesignqualitycontrolsoftwarevisualization

4.00 score 2 scripts 355 downloads 4 exports 39 dependencies

Last updated from:4552d73065 (on RELEASE_3_23). Checks:1 WARNING, 7 NOTE, 2 OK. Indexed: no.

TargetResultTimeFilesSyslog
bioc-checksWARNING155
linux-devel-x86_64NOTE209
source / vignettesOK228
linux-release-x86_64NOTE192
macos-release-arm64NOTE89
macos-oldrel-arm64NOTE90
windows-develNOTE103
windows-releaseNOTE87
windows-oldrelNOTE108
wasm-releaseOK129

Exports:omixerCorromixerRandomixerSheetomixerSpecific

Dependencies:bitbit64clicliprcpp11crayondplyrfarverforcatsgenericsggplot2gluegridExtragtablehmsisobandlabelinglifecyclemagrittrpillarpkgconfigprettyunitsprogressR6RColorBrewerreadrrlangS7scalesstringistringrtibbletidyselecttzdbutf8vctrsviridisLitevroomwithr

Omixer: multivariate and reproducible randomization to proactively counter batch effects in omics studies

Lucy Sinke, Davy Cats, Bas Heijmans

Rendered fromomixer-vignette.Rmdusingknitr::rmarkdownon May 29 2026.

Last update: 2021-08-16
Started: 2020-06-02