Package: PTMods 1.0.0

Guillaume Deflandre

PTMods: Managing Post-Translational Modifications in R

An interface to the community supported database for amino acid/protein modifications using mass spectrometry.

Authors:Laurent Gatto [aut], Sebastian Gibb [aut], Guillaume Deflandre [cre]

PTMods_1.0.0.tar.gz
PTMods_1.0.0.zip(r-4.7)PTMods_1.0.0.zip(r-4.6)PTMods_1.0.0.zip(r-4.5)
PTMods_1.0.0.tgz(r-4.6-any)PTMods_1.0.0.tgz(r-4.5-any)
PTMods_1.0.0.tar.gz(r-4.7-any)PTMods_1.0.0.tar.gz(r-4.6-any)
PTMods_1.0.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
PTMods/json (API)
NEWS

# Install 'PTMods' in R:
install.packages('PTMods', repos = c('https://bioc-release.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/rformassspectrometry/ptmods/issues

Datasets:

On BioConductor:PTMods-1.1.0(bioc 3.24)PTMods-1.0.0(bioc 3.23)

proteomicsmassspectrometryamino-acid-modificationsmass-spectrometryprotein

8.12 score 11 stars 40 packages 599 downloads 7 exports 0 dependencies

Last updated from:83e201813d (on RELEASE_3_23). Checks:1 WARNING, 9 OK. Indexed: no.

TargetResultTimeFilesSyslog
bioc-checksWARNING159
linux-devel-x86_64OK214
source / vignettesOK169
linux-release-x86_64OK229
macos-release-arm64OK99
macos-oldrel-arm64OK78
windows-develOK132
windows-releaseOK102
windows-oldrelOK105
wasm-releaseOK138

Exports:addFixedModificationsaddModificationsaddVariableModificationscombineModificationsconvertAnnotationgetCanonicalSequencegetModificationsCounts

Dependencies:

The PTMods package: a package to handle post-translational modifications

Rendered fromPTMods.Rmdusingknitr::rmarkdownon May 29 2026.

Last update: 2026-03-23
Started: 2026-01-06