1 Description of pasilla dataset | 2 Required software | 3 Downloading the pasilla data | 4 Downloading the reference genome | 5 Transcript quantification with kallisto | APPENDIX | A Session information | B References
Package: PasillaTranscriptExpr 1.40.0
Malgorzata Nowicka
PasillaTranscriptExpr: Data package with transcript expression obtained with kallisto from pasilla knock-down RNA-Seq data from Brooks et al.
Provides kallisto workflow and transcript expression of RNA-Seq data from Brooks et al.
Authors:
PasillaTranscriptExpr_1.40.0.tar.gz
PasillaTranscriptExpr_1.40.0.tar.gz(r-4.7-any)PasillaTranscriptExpr_1.40.0.tar.gz(r-4.6-any)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
PasillaTranscriptExpr/json (API)
| # Install 'PasillaTranscriptExpr' in R: |
| install.packages('PasillaTranscriptExpr', repos = c('https://bioc-release.r-universe.dev', 'https://cloud.r-project.org')) |
On BioConductor:PasillaTranscriptExpr-1.41.0(data/experiment 3.24)PasillaTranscriptExpr-1.40.0(data/experiment 3.23)
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
drosophila_melanogaster_datagenomernaseqdataexperimentdatasequencingdataexpressiondatageodatapkg
Last updated from:748d994e5b (on RELEASE_3_23). Checks:1 WARNING, 3 OK. Indexed: no.
This is a data package. Data packages may be large and do not get checked across all platforms.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| bioc-checks | WARNING | 151 | ||
| linux-devel | OK | 169 | ||
| source / vignettes | OK | 231 | ||
| linux-release | OK | 184 |
Exports:
Dependencies:
Readme and manuals
Help Manual
| Help page | Topics |
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