Package: PathNet Type: Package Title: An R package for pathway analysis using topological information Version: 1.52.0 Author: Bhaskar Dutta , Anders Wallqvist , and Jaques Reifman Maintainer: Ludwig Geistlinger Description: PathNet uses topological information present in pathways and differential expression levels of genes (obtained from microarray experiment) to identify pathways that are 1) significantly enriched and 2) associated with each other in the context of differential expression. The algorithm is described in: PathNet: A tool for pathway analysis using topological information. Dutta B, Wallqvist A, and Reifman J. Source Code for Biology and Medicine 2012 Sep 24;7(1):10. License: GPL-3 Suggests: PathNetData, RUnit, BiocGenerics biocViews: Pathways, DifferentialExpression, MultipleComparison, KEGG, NetworkEnrichment, Network Repository: Bioconductor 3.23 Date/Publication: 2026-04-28 12:51:29 UTC RemoteUrl: https://github.com/bioc/PathNet RemoteRef: RELEASE_3_23 RemoteSha: 5d260cf0e0f8d579c46d48102a2940fb495d411a NeedsCompilation: no Packaged: 2026-11-09 08:33:22 UTC; root