| Title: | Data package for phylogenetic profile analysis using PhyloProfile tool |
|---|---|
| Description: | Two experimental datasets to illustrate running and analysing phylogenetic profiles with PhyloProfile package. |
| Authors: | Vinh Tran [aut, cre] (ORCID: <https://orcid.org/0000-0001-6772-7595>), Ingo Ebersberger [aut], Hannah Mülbaier [ctb], Arpit Jain [ctb] |
| Maintainer: | Vinh Tran <[email protected]> |
| License: | MIT + file LICENSE |
| Version: | 1.26.1 |
| Built: | 2026-10-10 11:13:05 UTC |
| Source: | https://github.com/bioc/PhyloProfileData |
The PhyloProfileData package provides a collection of datasets to accompany the R package PhyloProfile, where they are used to illustrate how to run PhyloProfile and analyse its results. Briefly, it contains the phylogenetic profiles, the fasta sequences and the domain annotations for two experimental data sets, including human AMPK-TOR pathway proteins and BUSCO Arthropoda proteins.
More details of the datas can be found in the vignette "PhyloProfileData" using browseVignettes("PhyloProfileData").
Maintainer: Vinh Tran [email protected] (ORCID)
Authors:
Vinh Tran [email protected] (ORCID)
Ingo Ebersberger [email protected]
Other contributors:
Hannah Mülbaier [email protected] [contributor]
Arpit Jain [email protected] [contributor]
Useful links:
Report bugs at https://github.com/trvinh/PhyloProfileData/issues