Package: PtH2O2lipids
Title: P. tricornutum HPLC-ESI-MS Lipid Data from van Creveld et al.
        (2015)
Version: 1.38.0
Date: 2016-07-06
Authors@R: c( person("Shiri", "Graff van Creveld", email =
        "shirigraff@gmail.com", role = c("aut")), person("Shilo",
        "Rosenwasser", email = "shilo.rosenwasser@weizmann.ac.il", role
        = c("aut")), person("Daniella", "Schatz", email =
        "daniella.schatz@weizmann.ac.il", role = c("aut")),
        person("Ilan", "Koren", email = "ilan.koren@weizmann.ac.il",
        role = c("aut")), person("Assaf", "Vardi", email =
        "assaf.vardi@weizmann.ac.il", role = c("aut")), person("James",
        "Collins", email = "james.r.collins@aya.yale.edu", role =
        c("cre")) )
Depends: R (>= 3.3), xcms, CAMERA, LOBSTAHS, methods, utils
Suggests: gplots, RColorBrewer, cluster, vegan
Description: Annotated HPLC-ESI-MS lipid data in positive ionization
        mode from an experiment in which cultures of the marine diatom
        Phaeodactylum tricornutum were treated with various
        concentrations of hydrogen peroxide (H2O2) to induce oxidative
        stress. The experiment is described in Graff van Creveld, et
        al., 2015, "Early perturbation in mitochondria redox
        homeostasis in response to environmental stress predicts cell
        fate in diatoms," ISME Journal 9:385-395. PtH2O2lipids consists
        of two objects: A CAMERA xsAnnotate object
        (ptH2O2lipids$xsAnnotate) and LOBSTAHS LOBSet object
        (ptH2O2lipids$xsAnnotate$LOBSet). The LOBSet includes putative
        compound assignments from the default LOBSTAHS database. Isomer
        annotation is recorded in three other LOBSet slots.
License: MIT + file LICENSE
URL: http://dx.doi.org/10.1038/ismej.2014.136,
        https://github.com/vanmooylipidomics/PtH2O2lipids,
        http://www.whoi.edu/page.do?pid=133616&tid=282&cid=192529
BugReports: https://github.com/vanmooylipidomics/PtH2O2lipids/issues/new
biocViews: ReproducibleResearch, CellCulture, MassSpectrometryData,
        Phaeodactylum_tricornutum_data
NeedsCompilation: no
Author: Shiri Graff van Creveld [aut], Shilo Rosenwasser [aut],
        Daniella Schatz [aut], Ilan Koren [aut], Assaf Vardi [aut],
        James Collins [cre]
Maintainer: James Collins <james.r.collins@aya.yale.edu>
Config/pak/sysreqs: cmake libglpk-dev make libicu-dev libuv1-dev
        libxml2-dev libnetcdf-dev libssl-dev zlib1g-dev
Repository: Bioconductor 3.23
Date/Publication: 2026-04-28 12:30:09 UTC
RemoteUrl: https://github.com/bioc/PtH2O2lipids
RemoteRef: RELEASE_3_23
RemoteSha: 788d67a44412339d12dc43917e8a02335136d5ca
Packaged: 2026-10-10 11:10:23 UTC; root