[
  {
    "title": "QuasR: Quantification and annotation of short reads in R",
    "author": [
      {
        "given": "Dimos",
        "family": "Gaidatzis",
        "role": {},
        "email": {},
        "comment": {}
      },
      {
        "given": "Anita",
        "family": "Lerch",
        "role": {},
        "email": {},
        "comment": {}
      },
      {
        "given": "Florian",
        "family": "Hahne",
        "role": {},
        "email": {},
        "comment": {}
      },
      {
        "given": ["Michael", "B"],
        "family": "Stadler",
        "role": {},
        "email": {},
        "comment": {}
      }
    ],
    "journal": "Bioinformatics",
    "volume": "31",
    "number": "7",
    "pages": "1130--1132",
    "year": "2015",
    "note": "PMID:25417205",
    "doi": "10.1093/bioinformatics/btu781"
  },
  {
    "title": "Ultrafast and memory-efficient alignment of short DNA sequences to the human genome",
    "author": [
      {
        "given": "Ben",
        "family": "Langmead",
        "role": {},
        "email": {},
        "comment": {}
      },
      {
        "given": "Cole",
        "family": "Trapnell",
        "role": {},
        "email": {},
        "comment": {}
      },
      {
        "given": "Mihai",
        "family": "Pop",
        "role": {},
        "email": {},
        "comment": {}
      },
      {
        "given": ["Steven", "L"],
        "family": "Salzberg",
        "role": {},
        "email": {},
        "comment": {}
      }
    ],
    "journal": "Genome Biology",
    "volume": "10",
    "number": "3",
    "pages": "R25",
    "year": "2009",
    "note": "PMID:19261174",
    "doi": "10.1186/gb-2009-10-3-r25"
  },
  {
    "title": "Detection of splice junctions from paired-end RNA-seq data by SpliceMap",
    "author": [
      {
        "given": ["Kin", "Fai"],
        "family": "Au",
        "role": {},
        "email": {},
        "comment": {}
      },
      {
        "given": "Hui",
        "family": "Jiang",
        "role": {},
        "email": {},
        "comment": {}
      },
      {
        "given": "Lan",
        "family": "Lin",
        "role": {},
        "email": {},
        "comment": {}
      },
      {
        "given": "Yi",
        "family": "Xing",
        "role": {},
        "email": {},
        "comment": {}
      },
      {
        "given": ["Wing", "Hung"],
        "family": "Wong",
        "role": {},
        "email": {},
        "comment": {}
      }
    ],
    "journal": "Nucleic Acids Research",
    "volume": "38",
    "number": "14",
    "pages": "4570--4578",
    "year": "2010",
    "note": "PMID:20371516",
    "doi": "10.1093/nar/gkq211"
  },
  {
    "title": "HISAT: a fast spliced aligner with low memory requirements",
    "author": [
      {
        "given": "Daehwan",
        "family": "Kim",
        "role": {},
        "email": {},
        "comment": {}
      },
      {
        "given": "Ben",
        "family": "Langmead",
        "role": {},
        "email": {},
        "comment": {}
      },
      {
        "given": ["Steven", "L"],
        "family": "Salzberg",
        "role": {},
        "email": {},
        "comment": {}
      }
    ],
    "journal": "Nature Methods",
    "volume": "12",
    "pages": "357--360",
    "year": "2015",
    "note": "PMID:25751142",
    "doi": "10.1038/nmeth.3317"
  }
]
