Changes in version 1.15 o Default database version has been updated to v10-clust (including the motif annotations in the package) o New function: showLogo() shows the motif enrichment table as HTML. o Fix for maxRank checks: Now takes into account number of genes/regions in the database. o Support for new database format o importAnnotations(): Now adds the imported file name as attribute Changes in version 1.11 o importRankings() updates for extended compatibility: * indexCol by default is now 'NULL', which will take the first column. If it is set to any other column, that one will be used instead. Changes in version 1.7 o New function: reRank o ImportRankings: Added arguments "indexCol" and "warnMissingColumns" o Class rankingRcisTarget: Added methods rownames and colnames o Support for .parquet databases Changes in version 1.3 o Added function: getMotifAnnotation Changes in version 0.99.7 o Main update: Re-formatted ranking databases. They are now loaded from .feather files (and therefore, they are transposed: motifs are stored as rows, and genes/regions as columns, which allows to load only specific genes/region) Changes in version 0.99.6 o Main update: Re-formatted annotation database. For easier subsetting. Changes in version 0.99.1 o Main update: New class for the Rankings (rankingRcisTarget) Changes in version 0.7 o Converted the ranking databases to an S4 class. Changes in version 0.6 o Added function addLogo() o AUC is now returned as a class