Package: SBGNview.data Title: Supporting datasets for SBGNview package Description: This package contains: 1. A microarray gene expression dataset from a human breast cancer study. 2. A RNA-Seq gene expression dataset from a mouse study on IFNG knockout. 3. ID mapping tables between gene IDs and SBGN-ML file glyph IDs. 4. Percent of orthologs detected in other species of the genes in a pathway. Cutoffs of this percentage for defining if a pathway exists in another species. 5. XML text of SBGN-ML files for all pre-collected pathways. Version: 1.26.0 Author: Xiaoxi Dong*, Kovidh Vegesna*, Weijun Luo Maintainer: Weijun Luo Depends: R (>= 3.6) License: AGPL-3 Collate: data.R LazyData: FALSE Imports: knitr, rmarkdown, bookdown Suggests: SummarizedExperiment RoxygenNote: 7.1.1 VignetteBuilder: knitr biocViews: ExperimentData, CancerData, BreastCancerData, MicroarrayData, GEO, RNASeqData Config/pak/sysreqs: cmake make libuv1-dev Repository: Bioconductor 3.23 Date/Publication: 2026-04-28 12:33:21 UTC RemoteUrl: https://github.com/bioc/SBGNview.data RemoteRef: RELEASE_3_23 RemoteSha: b1663a69ae087b9b61c3f2c8acf464d799eb7f5a NeedsCompilation: no Packaged: 2026-10-10 11:12:49 UTC; root