Type: Package
Package: SMAD
Title: Statistical Modelling of AP-MS Data (SMAD)
Version: 1.28.0
Authors@R: 
    person("Qingzhou", "Zhang", , "zqzneptune@hotmail.com", role = c("aut", "cre"),
           comment = c(ORCID = "0000-0001-9540-2624"))
Description: Assigning probability scores to protein interactions
        captured in affinity purification mass spectrometry (AP-MS)
        expriments to infer protein-protein interactions. The output
        would facilitate non-specific background removal as
        contaminants are commonly found in AP-MS data.
License: MIT + file LICENSE
URL: https://github.com/zqzneptune/SMAD
BugReports: https://github.com/zqzneptune/SMAD/issues
Depends: R (>= 4.5.0)
Imports: data.table, dplyr, magrittr (>= 1.5), Rcpp (>= 1.0.0),
        RcppAlgos, stats, tidyr, utils
Suggests: BiocStyle, knitr, rmarkdown, testthat
LinkingTo: Rcpp
VignetteBuilder: knitr
biocViews: MassSpectrometry, Proteomics, Software
Encoding: UTF-8
RoxygenNote: 7.3.3
Config/pak/sysreqs: libgmp3-dev libicu-dev
Repository: Bioconductor 3.23
Date/Publication: 2026-04-28 12:49:29 UTC
RemoteUrl: https://github.com/bioc/SMAD
RemoteRef: RELEASE_3_23
RemoteSha: 5a95c2962baa3d94f8a958ee7ac8099702846224
NeedsCompilation: yes
Packaged: 2026-07-06 10:36:03 UTC; root
Author: Qingzhou Zhang [aut, cre] (ORCID:
    <https://orcid.org/0000-0001-9540-2624>)
Maintainer: Qingzhou Zhang <zqzneptune@hotmail.com>