Package: SPEM 1.52.0
Xinyi YANG
SPEM: S-system parameter estimation method
This package can optimize the parameter in S-system models given time series data
Authors:
SPEM_1.52.0.tar.gz
SPEM_1.52.0.zip(r-4.7)SPEM_1.52.0.zip(r-4.6)SPEM_1.52.0.zip(r-4.5)
SPEM_1.52.0.tgz(r-4.6-any)SPEM_1.52.0.tgz(r-4.5-any)
SPEM_1.52.0.tar.gz(r-4.7-any)SPEM_1.52.0.tar.gz(r-4.6-any)
SPEM_1.52.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
SPEM/json (API)
NEWS
| # Install 'SPEM' in R: |
| install.packages('SPEM', repos = c('https://bioc-release.r-universe.dev', 'https://cloud.r-project.org')) |
- sos - SOS pathway time series data
On BioConductor:SPEM-1.53.0(bioc 3.24)SPEM-1.52.0(bioc 3.23)
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
networknetworkinferencesoftware
Last updated from:a7d50789da (on RELEASE_3_23). Checks:1 ERROR, 7 NOTE, 2 OK. Indexed: no.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| bioc-checks | ERROR | 136 | ||
| linux-devel-x86_64 | NOTE | 143 | ||
| source / vignettes | OK | 162 | ||
| linux-release-x86_64 | NOTE | 174 | ||
| macos-release-arm64 | NOTE | 78 | ||
| macos-oldrel-arm64 | NOTE | 107 | ||
| windows-devel | NOTE | 84 | ||
| windows-release | NOTE | 75 | ||
| windows-oldrel | NOTE | 78 | ||
| wasm-release | OK | 96 |
Exports:row_optimizes_diffSPEM
Dependencies:BiobaseBiocGenericscodetoolsdigestfuturefuture.applygenericsglobalslistenvnumDerivparallellyRcppRcppArmadilloRsolnptruncnorm
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| S-system parameter estimation method package | SPEM-package |
| Calculate parameters for one row | row_optimize row_optimize,ExpressionSet-method |
| Calculate slopes from time points and time series matrix. | s_diff s_diff,ExpressionSet-method |
| SOS pathway time series data | sos |
| S-system parameter estimation method | SPEM SPEM,ExpressionSet-method |