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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "SPIA" in publications use:'
type: software
title: 'SPIA: Signaling Pathway Impact Analysis (SPIA) using combined evidence of
  pathway over-representation and unusual signaling perturbations'
version: 2.64.0
identifiers:
- type: doi
  value: 10.32614/CRAN.package.SPIA
abstract: This package implements the Signaling Pathway Impact Analysis (SPIA) which
  uses the information form a list of differentially expressed genes and their log
  fold changes together with signaling pathways topology, in order to identify the
  pathways most relevant to the condition under the study.
authors:
- family-names: Tarca
  given-names: Adi Laurentiu
  email: atarca@med.wayne.edu
- family-names: Kathri
  given-names: Purvesh
  email: purvesh@cs.wayne.edu
- family-names: Draghici
  given-names: Sorin
  email: sorin@wayne.edu
preferred-citation:
  type: article
  title: A novel signaling pathway impact analysis
  authors:
  - family-names: Tarca
    given-names: Adi L.
  - family-names: Draghici
    given-names: Sorin
    email: sorin@wayne.edu
  - family-names: Khatri
    given-names: Purvesh
  - family-names: Hassan
    given-names: Sonia S
  - family-names: Mittal
    given-names: Pooja
  - family-names: Kim
    given-names: Jung-sun
  - family-names: Kim
    given-names: Chong Jai
  - family-names: Kusanovic
    given-names: Juan Pedro
  - family-names: Romero
    given-names: Roberto
  journal: Bioinformatics
  year: '2008'
  volume: '25'
  issue: '1'
repository: https://bioc-release.r-universe.dev
commit: 07118ad4190a5f6e61ba2d167cff3ca3ece37f74
url: http://bioinformatics.oxfordjournals.org/cgi/reprint/btn577v1
date-released: '2025-01-20'
contact:
- family-names: Tarca
  given-names: Adi Laurentiu
  email: atarca@med.wayne.edu