Package: Scale4C
Type: Package
Title: Scale4C: an R/Bioconductor package for scale-space
        transformation of 4C-seq data
Version: 1.34.0
Date: 2025-06-27
Author: Carolin Walter
Maintainer: Carolin Walter <carolin.walter@uni-muenster.de>
Imports: methods, grDevices, graphics, utils
Depends: R (>= 3.5.0), smoothie, GenomicRanges, IRanges,
        SummarizedExperiment
Suggests:
Description: Scale4C is an R/Bioconductor package for scale-space
        transformation and visualization of 4C-seq data. The
        scale-space transformation is a multi-scale visualization
        technique to transform a 2D signal (e.g. 4C-seq reads on a
        genomic interval of choice) into a tesselation in the scale
        space (2D, genomic position x scale factor) by applying
        different smoothing kernels (Gauss, with increasing sigma).
        This transformation allows for explorative analysis and
        comparisons of the data's structure with other samples.
License: LGPL-3
biocViews: Visualization, QualityControl, DataImport, Sequencing,
        Coverage
Config/pak/sysreqs: zlib1g-dev
Repository: Bioconductor 3.23
Date/Publication: 2026-04-28 12:45:48 UTC
RemoteUrl: https://github.com/bioc/Scale4C
RemoteRef: RELEASE_3_23
RemoteSha: 264dcf3a5620e746c268da8e8ecfd20b570531a8
NeedsCompilation: no
Packaged: 2026-10-01 11:18:30 UTC; root