Package: SigFuge 1.50.0

Patrick Kimes

SigFuge: SigFuge

Algorithm for testing significance of clustering in RNA-seq data.

Authors:Patrick Kimes, Christopher Cabanski

SigFuge_1.50.0.tar.gz
SigFuge_1.50.0.zip(r-4.7-any)SigFuge_1.50.0.zip(r-4.6-any)SigFuge_1.50.0.zip(r-4.5-any)
SigFuge_1.50.0.tgz(r-4.6-any)SigFuge_1.50.0.tgz(r-4.5-any)
SigFuge_1.50.0.tar.gz(r-4.7-any)SigFuge_1.50.0.tar.gz(r-4.6-any)
SigFuge_1.50.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
SigFuge/json (API)

# Install 'SigFuge' in R:
install.packages('SigFuge', repos = c('https://bioc-release.r-universe.dev', 'https://cloud.r-project.org'))
Datasets:
  • geneAnnot - CDKN2A gene locus annotation
  • geneDepth - Coverage matrix across CDKN2A gene locus

On CRAN:

Conda:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

clusteringvisualizationrnaseqimmunooncology

1.48 score 3 scripts 1 mentions 4 exports 28 dependencies

Last updated from:9253bf39b9 (on RELEASE_3_23). Checks:9 ERROR, 1 OK. Indexed: no.

TargetResultTimeFilesSyslog
bioc-checksERROR246
linux-devel-x86_64ERROR275
source / vignettesERROR277
linux-release-x86_64ERROR282
macos-release-arm64ERROR125
macos-oldrel-arm64ERROR142
windows-develERROR604
windows-releaseERROR658
windows-oldrelERROR533
wasm-releaseOK231

Exports:SFfigureSFlabelsSFnormalizeSFpval

Dependencies:BiocGenericsclicpp11farvergenericsGenomicRangesggplot2gluegtableIRangesisobandlabelinglifecyclematlabplyrR6RColorBrewerRcppreshaperlangS4VectorsS7scalesSeqinfosigclustvctrsviridisLitewithr