# --------------------------------------------
# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
# --------------------------------------------
 
cff-version: 1.2.0
message: 'To cite package "Statial" in publications use:'
type: software
license: GPL-3.0-only
title: 'Statial: A package to identify changes in cell state relative to spatial associations'
version: 1.14.0
doi: 10.1101/2024.09.03.611109
identifiers:
- type: doi
  value: 10.32614/CRAN.package.Statial
- type: url
  value: https://github.com/SydneyBioX/Statial/issues
abstract: Statial is a suite of functions for identifying changes in cell state. The
  functionality provided by Statial provides robust quantification of cell type localisation
  which are invariant to changes in tissue structure. In addition to this Statial
  uncovers changes in marker expression associated with varying levels of localisation.
  These features can be used to explore how the structure and function of different
  cell types may be altered by the agents they are surrounded with.
authors:
- family-names: Ameen
  given-names: Farhan
  email: fame2827@uni.sydney.edu.au
- family-names: Iyengar
  given-names: Sourish
  email: sourish.iyengar@sydney.edu.au
- family-names: Qin
  given-names: Alex
  email: alex.qin@sydney.edu.au
- family-names: Ghazanfar
  given-names: Shila
  email: shila.ghazanfar@sydney.edu.au
- family-names: Patrick
  given-names: Ellis
  email: ellis.patrick@sydney.edu.au
preferred-citation:
  type: article
  title: 'Kontextual: Reframing analysis of spatial omics data reveals consistent
    cell relationships across images'
  authors:
  - family-names: Ameen
    given-names: Farhan
    email: fame2827@uni.sydney.edu.au
  - family-names: Robertson
    given-names: Nicholas
  - family-names: Lin
    given-names: David
  - family-names: Ghazanfar
    given-names: Shila
    email: shila.ghazanfar@sydney.edu.au
  - family-names: Patrick
    given-names: Ellis
    email: ellis.patrick@sydney.edu.au
  year: '2024'
  journal: bioRxiv
  doi: 10.1101/2024.09.03.611109
  url: https://www.biorxiv.org/content/early/2024/09/06/2024.09.03.611109
repository: https://bioc-release.r-universe.dev
repository-code: https://github.com/SydneyBioX/Statial
commit: f15705a083484b7981fc9f9070e6ca85e6f16304
url: https://sydneybiox.github.io/Statial
date-released: '2025-10-14'
contact:
- family-names: Ameen
  given-names: Farhan
  email: fame2827@uni.sydney.edu.au