# --------------------------------------------
# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
# --------------------------------------------
 
cff-version: 1.2.0
message: 'To cite package "SurfR" in publications use:'
type: software
license: GPL-3.0-only
title: 'SurfR: Surface Protein Prediction and Identification'
version: 1.8.0
doi: 10.1093/bioadv/vbae201
identifiers:
- type: doi
  value: 10.32614/CRAN.package.SurfR
abstract: Identify Surface Protein coding genes from a list of candidates. Systematically
  download data from GEO and TCGA or use your own data. Perform DGE on bulk RNAseq
  data. Perform Meta-analysis. Descriptive enrichment analysis and plots.
authors:
- family-names: Maurizio
  given-names: Aurora
  email: auroramaurizio1@gmail.com
  orcid: https://orcid.org/0000-0002-7194-4637
- family-names: Tascini
  given-names: Anna Sofia
  email: volpesofi@gmail.com
  orcid: https://orcid.org/0000-0001-5731-5490
preferred-citation:
  type: article
  title: 'SurfR: Riding the wave of RNA-Seq data with a comprehensive Bioconductor
    package to identify Surface Protein Coding Genes'
  authors:
  - family-names: Maurizio
    given-names: Aurora
    email: auroramaurizio1@gmail.com
    orcid: https://orcid.org/0000-0002-7194-4637
  - family-names: Tascini
    given-names: Anna Sofia
    email: volpesofi@gmail.com
    orcid: https://orcid.org/0000-0001-5731-5490
  - family-names: Morelli
    given-names: Marco J.
  year: '2024'
  journal: Bioinformatics Advances
  doi: 10.1093/bioadv/vbae201
repository: https://bioc-release.r-universe.dev
repository-code: https://github.com/auroramaurizio/SurfR
commit: fba3adcf6f87b0857b704c032dd09e124c453d24
url: https://github.com/auroramaurizio/SurfR
date-released: '2026-04-28'
contact:
- family-names: Maurizio
  given-names: Aurora
  email: auroramaurizio1@gmail.com
  orcid: https://orcid.org/0000-0002-7194-4637