Data Introduction | Loading the data | Data creation | Genes information | GISTIC results | Gene expression data | DNA methylation and Gene expression data | Mutation data | Biogrid data | Histone marks | Session info
Package: TCGAWorkflowData 1.36.0
Tiago Chedraoui Silva
TCGAWorkflowData: Data for TCGA Workflow
This experimental data package contains 11 data sets necessary to follow the "TCGA Workflow: Analyze cancer genomics and epigenomics data using Bioconductor packages".
Authors:
TCGAWorkflowData_1.36.0.tar.gz
TCGAWorkflowData_1.36.0.tar.gz(r-4.7-any)TCGAWorkflowData_1.36.0.tar.gz(r-4.6-any)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
TCGAWorkflowData/json (API)
| # Install 'TCGAWorkflowData' in R: |
| install.packages('TCGAWorkflowData', repos = c('https://bioc-release.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/bioinformaticsfmrp/tcgaworkflow/issues
On BioConductor:TCGAWorkflowData-1.37.0(data/experiment 3.24)TCGAWorkflowData-1.36.0(data/experiment 3.23)
experimentdatahomo_sapiens_datamicroarraydatacancerdatabioconductortcgatcgabiolinksdatapkg
Last updated from:71f6da26f5 (on RELEASE_3_23). Checks:1 ERROR, 3 OK. Indexed: no.
This is a data package. Data packages may be large and do not get checked across all platforms.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| bioc-checks | ERROR | 151 | ||
| linux-devel | OK | 461 | ||
| source / vignettes | OK | 873 | ||
| linux-release | OK | 441 |
Exports:
Dependencies:abindBiobaseBiocGenericsDelayedArraygenericsGenomicRangesIRangeslatticeMatrixMatrixGenericsmatrixStatsS4ArraysS4VectorsSeqinfoSparseArraySummarizedExperimentXVector
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Data for TCGA Workflow | TCGAWorkflowData |
